| Subfamily | Bolitophilinae Winnertz, 1863
| 4 76 | Genera Species |
| Subfamily | Diadocidiinae Winnertz, 1863 ⇒ Diadocidiini
| 1 0 | Genus Species |
| Subfamily | Ditomyiinae Edwards, 1921
| 1 82 | Genus Species |
| Subfamily | Eudicraninae Väisänen, 1984
| 1 1 | Genus Species |
| Subfamily | Gnoristinae Edwards, 1925
| 2 3 | Genera Species |
| Subfamily | Keratoplatinae
| 1 2 | Genus Species |
| Subfamily | Leiinae Edwards, 1925
| 2 9 | Genera Species |
| Subfamily | Lygistorhininae Edwards, 1925
| 1 33 | Genus Species |
| Subfamily | Manotinae Hendel, 1936
| 15 738 | Genera Species |
| Subfamily | Metanepsiinae
| 0 0 | Genera Species |
| Subfamily | Metanepsinae
| 1 2 | Genus Species |
| Subfamily | Mycetophilinae ♰ Edwards, 1925
| 70 7216 | Genera Species |
| Subfamily | Mycomyinae Edwards, 1925 ⇒ Mycomyiini
| 0 0 | Genera Species |
| Subfamily | Sciophilinae Edwards, 1809
| 131 3145 | Genera Species |
| Genus | Abmyceta Lane, 1955
| 0 | Species |
| Genus | Acomopterella Zaitzev, 1989
| 4 | Species |
| Genus | Aenemia
| 3 | Species |
| Genus | Agaricobia Philippi, 1865
| 1 | Species |
| Genus | Agaromya Rondani, 1861
| 1 | Species |
| Genus | Agaromyia Marschall, 1873
| 0 | Species |
| Genus | Alavamanota ♰ Blagoderov & Arillo, 2002
| 2 | Species |
| Genus | Allactonerura
| 1 | Species |
| Genus | Allophallus Dziedzicki, 1923 ⇒ Epicypta
| 2 | Species |
| Genus | Anaclinia Winnertz, 1863 ⇒ Neuratelia
| 2 | Species |
| Genus | Anacoloptera ♰ Handlirsch, 1906
| 1 | Species |
| Genus | Aphanizophleps Enderlein, 1910
| 2 | Species |
| Genus | Aphelomera Skuse, 1888 ⇒ Neoaphelomera
| 12 | Species |
| Genus | Apolephhthisa
| 1 | Species |
| Genus | Apolephthisia
| 1 | Species |
| Genus | Apoliphthisa Jenkinson, 1908 ⇒ Apolephthisa
| 0 | Species |
| Genus | Araeostylus Munroe, 1974
| 0 | Species |
| Genus | Archaemacrocera ♰ Meunier, 1917
| 1 | Species |
| Genus | Archeoboletina Meunier, 1904
| 0 | Species |
| Genus | Armbrusteleia ♰ Evenhuis, 1994
| 2 | Species |
| Genus | Asiomyceta ♰ Hong, 2002
| 1 | Species |
| Genus | Atalosciophila ♰ Ren, 1995
| 1 | Species |
| Genus | Austroleptomorphus Matile, 1977
| 0 | Species |
| Genus | Austrolocymmerus Freeman, 1954
| 0 | Species |
| Genus | Ayana Schiner, 1868 ⇒ Azana
| 0 | Species |
| Genus | Aysenmyia Duret, 1979
| 1 | Species |
| Genus | Baisepesthoneura ♰ Blagoderov, 1998
| 1 | Species |
| Genus | Baisodicrana ♰ Blagoderov, 1995
| 3 | Species |
| Genus | Belgorodskaya
| 0 | Species |
| Genus | Bicornula ♰ Hong, 2002
| 2 | Species |
| Genus | Bolithobia Rondani, 1856
| 1 | Species |
| Genus | Bolithomia Neave, 1939
| 0 | Species |
| Genus | Bolithomya
| 1 | Species |
| Genus | Bolithomyza Rondani, 1856 ⇒ Zygomyia
| 1 | Species |
| Genus | Brachycampta Winnertz, 1863 ⇒ Allodia
| 54 | Species |
| Genus | Brachydicania
| 1 | Species |
| Genus | Brachydicrania Skuse, 1888 ⇒ Exechia
| 6 | Species |
| Genus | Brevocornu
| 1 | Species |
| Genus | Calomycomya Vaisanen, 1984
| 0 | Species |
| Genus | Calosymmerus Munroe, 1974
| 0 | Species |
| Genus | Campara Harrison, 1966
| 0 | Species |
| Genus | Cecidomium ♰ Westwood, 1854
| 1 | Species |
| Genus | Celebesomyia Saigusa, 1973
| 1 | Species |
| Genus | Cenomycetophila Martins-Neto, 2001
| 1 | Species |
| Genus | Cesamya Kocak & Kemal, 2010 ⇒ Mycomya
| 0 | Species |
| Genus | Chaetomegalosphys Lengersdorf, 1930
| 2 | Species |
| Genus | Chalcedon
| 1 | Species |
| Genus | Chalcedona
| 1 | Species |
| Genus | Cleodice Rafinesque, 1815 ⇒ Cordyla
| 0 | Species |
| Genus | Cnephaeophila Philippi, 1865 ⇒ Mycomya
| 1 | Species |
| Genus | Coheromyia Vaisanen, 1984
| 0 | Species |
| Genus | Cretomanota Amorim, Oliveira, Do Carmo & Ribeiro, 2022
| 0 | Species |
| Genus | Cymomya Vaisanen, 1984
| 0 | Species |
| Genus | Dinempheria Matile, 1979
| 7 | Species |
| Genus | Diomonus Walker, 1848 ⇒ Leptomorphus
| 5 | Species |
| Genus | Doggeria Handlirsch, 1906
| 3 | Species |
| Genus | Dongbeimyceta ♰ Hong, 2002
| 1 | Species |
| Genus | Drepanorzeckia ♰ Blagoderov, 1997
| 3 | Species |
| Genus | Dynatostoma
| 1 | Species |
| Genus | Ectrepesthonerua
| 1 | Species |
| Genus | Ekhiritus ♰ Blagoderov, 1995
| 1 | Species |
| Genus | Ekhirtus
| 1 | Species |
| Genus | Empalia Winnertz, 1863 ⇒ Synapha
| 4 | Species |
| Genus | Empheria ♰ Pictet-Baraban & Hagen, 1856 ⇒ Neoempheria
| 17 | Species |
| Genus | Eoexechia ♰ Camier & Nel, 2010
| 1 | Species |
| Genus | Eomyceta ♰ Hong, 2002
| 1 | Species |
| Genus | Eosciophila ♰ Hong, 1974
| 1 | Species |
| Genus | Eurycera Dziedzicki, 1885 ⇒ Allocotocera
| 3 | Species |
| Genus | Euryceras Marshall, 1896 ⇒ Allocotocera
| 1 | Species |
| Genus | Euryschalis Brunetti, 1912
| 1 | Species |
| Genus | Exechiites ♰ Blagoderov, 2000
| 1 | Species |
| Genus | Fungina Rondani, 1856
| 1 | Species |
| Genus | Fungivora Meigen, 1800 ⇒ Mycetophila
| 82 | Species |
| Genus | Fushunoboleta ♰ Hong, 2002
| 2 | Species |
| Genus | Fushunosciophila ♰ Hong, 2002
| 1 | Species |
| Genus | Fushunoxyela ♰ Hong, 2002
| 1 | Species |
| Genus | Glaphyoptera
| 2 | Species |
| Genus | Glaphyroptera ♰ Heer, 1852 ⇒ Neoglaphyroptera
| 25 | Species |
| Genus | Gnorista Berthold in Latreille, 1827 ⇒ Gnoriste
| 0 | Species |
| Genus | Gymnogonia Tuomikoski, 1966
| 0 | Species |
| Genus | Gymnoscutum Matile, 1977
| 0 | Species |
| Genus | Hertwigia Dziedzicki, 1885 ⇒ Dziedzickia
| 1 | Species |
| Genus | Heteropygium Dziedzicki, 1923
| 1 | Species |
| Genus | Huaxiamyceta ♰ Hong, 2002
| 1 | Species |
| Genus | Huaxiasciophilites ♰ Zhang & al., 2001
| 1 | Species |
| Genus | Huaxiatermes Ren, 1995
| 1 | Species |
| Genus | Huosciarites Hong, 2002
| 1 | Species |
| Genus | Ipsaneusidalys ♰ Blagoderov, 1998
| 4 | Species |
| Genus | Johannseni Guthrie, 1917 ⇒ Dynatosoma
| 1 | Species |
| Genus | Johannsenia Guthrie, 1917
| 0 | Species |
| Genus | Jugazana Coher, 1995
| 0 | Species |
| Genus | Katopygia Martinsson & Kjaerandsen, 2012
| 0 | Species |
| Genus | Kerteszina Enderlein, 1913
| 1 | Species |
| Genus | Lastosoma
| 1 | Species |
| Genus | Leiomyia Edwards, 1913 ⇒ Lejomya
| 7 | Species |
| Genus | Leja Dejean, 1821 ⇒ Leia
| 27 | Species |
| Genus | Lejomya Rondani, 1856 ⇒ Leia
| 1 | Species |
| Genus | Lejosoma Rondani, 1856 ⇒ Lejomya
| 0 | Species |
| Genus | Lusitanoneura Ribeiro & Chandler, 2007
| 2 | Species |
| Genus | Lyptolape ♰ Blagoderov, 1998
| 0 | Species |
| Genus | Megophtalmidia Dziedzicki, 1889
| 19 | Species |
| Genus | Melosymmerus ♰ Munroe, 1974
| 0 | Species |
| Genus | Mesosciophilites ♰ Kovalev, 1986
| 1 | Species |
| Genus | Metahadroneura ♰ Blagoderov, 1998
| 2 | Species |
| Genus | Metaleia ♰ Baxter, 1994
| 1 | Species |
| Genus | Micetomyza Rondani, 1861
| 0 | Species |
| Genus | Micosia Rondani, 1861
| 0 | Species |
| Genus | Micozetea Rondani, 1861
| 0 | Species |
| Genus | Microntos ♰ Kaddumi, 2005
| 1 | Species |
| Genus | Minymyceta ♰ Hong, 2002
| 1 | Species |
| Genus | Myacymo Vaisanen, 1984
| 0 | Species |
| Genus | Mycethophila Meigen, 1830 ⇒ Mycetophila
| 0 | Species |
| Genus | Mycetomiza Rondani, 1861
| 0 | Species |
| Genus | Mycetomyza
| 2 | Species |
| Genus | Mycetophaetus ♰ Scudder, 1892
| 1 | Species |
| Genus | Mycetophilidae MyceoIntGen, 0
| 0 | Species |
| Genus | Mycomyiella Matile, 1973
| 9 | Species |
| Genus | Mycomyites ♰ Blagoderov, 2000
| 1 | Species |
| Genus | Mycomyopsis Vaisanen, 1984
| 0 | Species |
| Genus | Mycosia Rondani, 1861
| 1 | Species |
| Genus | Mycothera Winnertz, 1863 ⇒ Mycetophila
| 10 | Species |
| Genus | Mycozetaea Rondani, 1861
| 0 | Species |
| Genus | Mysetophila
| 1 | Species |
| Genus | Neallodia Edwards, 1932
| 3 | Species |
| Genus | Necromyza ♰ Scudder, 1895
| 1 | Species |
| Genus | Neglaphyroptera
| 1 | Species |
| Genus | Neoaustrosynapha Duret, 1980
| 0 | Species |
| Genus | Neoemphera
| 2 | Species |
| Genus | Neoglaphyoptera
| 1 | Species |
| Genus | Neoglaphyroptera Osten Sacken, 1878 ⇒ Leia
| 24 | Species |
| Genus | Neomycomya Vaisanen, 1984
| 0 | Species |
| Genus | Neoparastemma Santos Abreu, 1920 ⇒ Megophthalmidia
| 1 | Species |
| Genus | Neuratalia
| 1 | Species |
| Genus | Neurocompsa Enderlein, 1910
| 1 | Species |
| Genus | Neurotelia Rondani, 1856 ⇒ Neuratelia
| 2 | Species |
| Genus | Neuroteliadup Rondani, 1856
| 0 | Species |
| Genus | Odontopoda Aldrich, 1897 ⇒ Neuratelia
| 5 | Species |
| Genus | Opistholoba Mik, 1891 ⇒ Mycetophila
| 1 | Species |
| Genus | Opsion Gistl, 1848
| 33 | Species |
| Genus | Orffelia
| 4 | Species |
| Genus | Oromyceta Lane, 1955
| 1 | Species |
| Genus | Pachipalpus Rondani, 1856 ⇒ Pachypalpus
| 1 | Species |
| Genus | Pachypalpus Macquart, 1834 ⇒ Cordyla
| 8 | Species |
| Genus | Palaecomoptera ♰ Blagoderov, 1997
| 5 | Species |
| Genus | Palaeoboletina ♰ Meunier, 1904
| 2 | Species |
| Genus | Palaeoepicypta Meunier, 1904
| 1 | Species |
| Genus | Palaeognoriste ♰ Meunier, 1904 ⇒ Lygistorrhina
| 5 | Species |
| Genus | Palaeophthinia Meunier, 1904
| 1 | Species |
| Genus | Palaeothoracotropis ♰ Blagoderov, 1998
| 2 | Species |
| Genus | Palaeotrichonta Meunier, 1904
| 1 | Species |
| Genus | Paléosyntemna Meunier, 1922
| 0 | Species |
| Genus | Paleosyntemna ♰ Meunier, 1922 ⇒ Palaeodocosia
| 1 | Species |
| Genus | Paraaustrosynapha Duret, 1980
| 0 | Species |
| Genus | Paracordyla Tuomikoski, 1966
| 0 | Species |
| Genus | Paradzickia ♰ Blagoderov, 1997
| 6 | Species |
| Genus | Parallodia Plassmann, 1969
| 0 | Species |
| Genus | Paraneurotelia Landrock, 1911 ⇒ Anaclileia
| 1 | Species |
| Genus | Parastemma Grzegorzek, 1885 ⇒ Tetragoneura
| 4 | Species |
| Genus | Paratina
| 1 | Species |
| Genus | Parempheria Enderlein, 1906 ⇒ Psyllipsocus
| 40 | Species |
| Genus | Parempherina Matile, 1977
| 0 | Species |
| Genus | Pareudicrana Tonnoir, 1929 ⇒ Eudicrana
| 2 | Species |
| Genus | Parexechia Becher, 1886 ⇒ Exechia
| 1 | Species |
| Genus | Pavomya Väisänen, 2013 ⇒ Mycomya
| 0 | Species |
| Genus | Pectinepsia ?ev?ík & Hippa, 2010
| 0 | Species |
| Genus | Pectinespia
| 2 | Species |
| Genus | Piotepalpus Rondani, 1858
| 2 | Species |
| Genus | Piothepalpus Rondani, 1858 ⇒ Piotepalpus
| 0 | Species |
| Genus | Plastacephala Enderlein, 1910
| 5 | Species |
| Genus | Pleonazoneura Enderlein, 1910
| 1 | Species |
| Genus | Pollicitator ♰ Blagoderov, 1995
| 3 | Species |
| Genus | Polyxena Meigen, 1800 ⇒ Cordyla
| 9 | Species |
| Genus | Proallodia ♰ Anonymous, 1944
| 2 | Species |
| Genus | Proanaclinia Meunier, 1904
| 2 | Species |
| Genus | Proapemon ♰ Melander, 1949
| 1 | Species |
| Genus | Proapolephthisa ♰ Armbruster, 1938
| 1 | Species |
| Genus | Prodelopsis ♰ Anonymous, 1944
| 2 | Species |
| Genus | Prodocidia Whalley, 1985
| 1 | Species |
| Genus | Prodocosia ♰ Armbruster, 1938
| 1 | Species |
| Genus | Proepicypta ♰ Armbruster, 1938
| 1 | Species |
| Genus | Prohadroneura ♰ Armbruster, 1938
| 1 | Species |
| Genus | Proleia ♰ Armbruster, 1938
| 1 | Species |
| Genus | Promycetomyia ♰ Armbruster, 1938
| 1 | Species |
| Genus | Proneoglaphyroptera ♰ Meunier, 1904
| 1 | Species |
| Genus | Pronovakia ♰ Armbruster, 1938
| 1 | Species |
| Genus | Prophronia ♰ Armbruster, 1938
| 1 | Species |
| Genus | Prophthinia ♰ Anonymous, 1944
| 2 | Species |
| Genus | Prospeolepta ♰ Blagoderov, 1995
| 4 | Species |
| Genus | Protasmanina ♰ Riek, 1954
| 1 | Species |
| Genus | Protrichonta ♰ Armbruster, 1938
| 1 | Species |
| Genus | Pseudoexechia
| 2 | Species |
| Genus | Psilosymmerus Munroe, 1974
| 0 | Species |
| Genus | Ramalana
| 2 | Species |
| Genus | Ramburia Warren, 1926 ⇒ Syrichtus
| 5 | Species |
| Genus | Rhymoleia Edwards, 1924 ⇒ Clastobasis
| 4 | Species |
| Genus | Rhymosia Curran, 1934 ⇒ Rymosia
| 44 | Species |
| Genus | Ristocordyla Rindal & Soli, 2010 ⇒ Brachypeza
| 0 | Species |
| Genus | Roomeria Meunier, 1914
| 1 | Species |
| Genus | Rubsaamiella Handlirsch, 1907
| 0 | Species |
| Genus | Rutrophora Skuse, 1901 ⇒ Megophthalmidia
| 1 | Species |
| Genus | Saigusais
| 1 | Species |
| Genus | Scatopsiara
| 1 | Species |
| Genus | Sciarella Meunier, 1904
| 1 | Species |
| Genus | Sciomorpha Meunier, 1922
| 3 | Species |
| Genus | Sciophilites ♰ Kovalev, 1990
| 1 | Species |
| Genus | Sciopila Rondani, 1856 ⇒ Sciophila
| 0 | Species |
| Genus | Scottella Enderlein, 1910
| 2 | Species |
| Genus | Scrobicula Matile, 1970
| 0 | Species |
| Genus | Scudderiella ♰ Meunier, 1894
| 1 | Species |
| Genus | Scudderina Handlirsch, 1919
| 1 | Species |
| Genus | Seiophila Walker, 1837 ⇒ Sciophila
| 0 | Species |
| Genus | Selkirkius Enderlein, 1940
| 1 | Species |
| Genus | Sinapha Rondani, 1856 ⇒ Synapha
| 0 | Species |
| Genus | Sinoboleta ♰ Hong, 2002
| 1 | Species |
| Genus | Sinoboletina Hong, 2002
| 1 | Species |
| Genus | Syndocosiella Vaisanen, 1982
| 0 | Species |
| Genus | Taiwanosciarodes Saigusa, 2018
| 1 | Species |
| Genus | Tantrus Munroe, 1974
| 0 | Species |
| Genus | Telmaphilus Becker, 1908 ⇒ Phronia
| 11 | Species |
| Genus | Tetragonides ♰ Bode, 1953
| 1 | Species |
| Genus | Thimna ♰ Giebel, 1856
| 1 | Species |
| Genus | Tlingitmyia Vaisanen, 1984
| 0 | Species |
| Genus | Tlingitmyiopsis Wu Hong & Yang, 1993
| 0 | Species |
| Genus | Truplayella Matile, 1978
| 0 | Species |
| Genus | Vellicocauda Munroe, 1974
| 0 | Species |
| Genus | Ventrilobus ♰ Munroe, 1974
| 0 | Species |
| Genus | Xenexechia Tuomikoski, 1966 ⇒ Exechiopsis
| 2 | Species |
| Genus | Zazicia ♰ Blagoderov, 1995
| 1 | Species |
| Genus | Zeliinia ♰ Blagoderov & Grimaldi, 2004
| 2 | Species |
| Genus | Zygomya
| 2 | Species |